STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PGK5zf-Tim10_DDP domain-containing protein. (95 aa)    
Predicted Functional Partners:
A0A0E0P3C3
zf-Tim10_DDP domain-containing protein.
   
 0.996
A0A0E0Q636
zf-Tim10_DDP domain-containing protein.
   
 0.996
A0A0E0NK53
Uncharacterized protein.
   
 0.961
A0A0E0NTS9
Uncharacterized protein.
   
 0.961
A0A0E0QP05
Uncharacterized protein.
   
 0.961
A0A0E0PBT4
Uncharacterized protein.
   
 0.912
A0A0E0NJA4
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.875
A0A0E0PD58
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.875
A0A0E0QLP7
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.824
A0A0E0RFY2
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.824
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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