STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PIH6SCD domain-containing protein. (1111 aa)    
Predicted Functional Partners:
A0A0E0ND42
Uncharacterized protein.
     
 0.634
A0A0E0N9E3
Uncharacterized protein.
     
 0.505
A0A0E0PPG0
Structural maintenance of chromosomes protein.
     
 0.505
A0A0E0N4Z1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.499
A0A0E0PNE9
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.499
A0A0E0Q397
Sister chromatid cohesion protein.
      
 0.489
A0A0E0N691
Uncharacterized protein.
      
 0.485
A0A0E0PRQ3
Uncharacterized protein.
      
 0.473
A0A0E0PAU2
Uncharacterized protein.
      
 0.465
A0A0E0PL46
Uncharacterized protein.
  
 
 0.462
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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