STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PLN0Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
A0A0E0R5N1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.560
A0A0E0P0C3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.540
A0A0E0NVU8
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.513
A0A0E0PK22
RING-type domain-containing protein.
      
 0.497
A0A0E0PIA9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.466
A0A0E0QH65
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.466
A0A0E0QU37
Uncharacterized protein.
   
 
 0.442
A0A0E0MS26
Uncharacterized protein.
     
 0.431
A0A0E0PI79
Uncharacterized protein.
     
 0.431
A0A0E0R8F6
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
    
  0.431
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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