STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PM92Uncharacterized protein; Belongs to the BI1 family. (266 aa)    
Predicted Functional Partners:
A0A0E0R9L1
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
      
 0.491
A0A0E0PXV1
Uncharacterized protein.
  
   0.460
A0A0E0RCT0
Uncharacterized protein.
      
 0.444
A0A0E0NST8
Matrin-type domain-containing protein.
      
 0.436
A0A0E0N953
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.400
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.