STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PN73Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
A0A0E0NHG1
Uncharacterized protein.
   
 0.946
A0A0E0NVY2
Uncharacterized protein.
    
  0.912
A0A0E0PU26
Uncharacterized protein.
   
 0.897
A0A0E0Q6N8
Uncharacterized protein.
   
 0.897
A0A0E0NL84
SKIP_SNW domain-containing protein.
    
 0.893
A0A0E0PV42
SKIP_SNW domain-containing protein.
    
 0.893
A0A0E0PFJ5
Poly [ADP-ribose] polymerase.
  
 0.886
A0A0E0PSG1
Uncharacterized protein.
   
 
 0.875
A0A0E0MYI0
PPIase cyclophilin-type domain-containing protein.
    
 0.865
A0A0E0QMC9
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.862
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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