STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PNY1OVATE domain-containing protein. (384 aa)    
Predicted Functional Partners:
A0A0E0NBZ3
POX domain-containing protein.
  
 
 0.553
A0A0E0NG31
VQ domain-containing protein.
  
     0.502
A0A0E0R4Y4
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.501
A0A0E0PBA2
Uncharacterized protein.
  
     0.495
A0A0E0RH92
Uncharacterized protein.
  
     0.489
A0A0E0NC31
Uncharacterized protein.
  
     0.486
A0A0E0P8H0
Uncharacterized protein.
  
     0.486
A0A0E0P7S7
Uncharacterized protein.
  
     0.484
A0A0E0R043
Uncharacterized protein.
  
     0.476
A0A0E0Q1G0
Uncharacterized protein.
  
     0.473
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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