STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PPM3Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
A0A0E0Q9V1
Uncharacterized protein.
      
 0.478
A0A0E0Q9X0
Uncharacterized protein.
      
 0.478
A0A0E0QLS0
Uncharacterized protein.
  
     0.474
A0A0E0QA68
Uncharacterized protein.
      
 0.473
A0A0E0PDZ0
Uncharacterized protein.
      
 0.436
A0A0E0MZ74
Uncharacterized protein.
  
     0.427
A0A0E0REN4
Uncharacterized protein.
  
     0.427
A0A0E0MYS6
Uncharacterized protein.
  
     0.423
A0A0E0NLI2
Uncharacterized protein.
  
     0.409
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.