STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PRV7Zinc_ribbon_12 domain-containing protein. (763 aa)    
Predicted Functional Partners:
A0A0E0NH98
Uncharacterized protein.
    
 0.713
A0A0E0N0W3
Uncharacterized protein.
    
 0.679
A0A0E0QV93
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.643
A0A0E0PA64
GTD-binding domain-containing protein.
  
 
  0.626
A0A0E0QZ08
Uncharacterized protein.
   
   0.625
A0A0E0RFU8
Uncharacterized protein.
  
  
 0.623
A0A0E0QE29
Uncharacterized protein.
  
 
  0.618
A0A0E0R922
Uncharacterized protein.
  
 
 0.615
A0A0E0QA45
Uncharacterized protein.
  
  0.605
A0A0E0P2A2
Uncharacterized protein.
  
  
 0.596
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.