STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0PZE9Beta-galactosidase. (716 aa)    
Predicted Functional Partners:
A0A0E0N7P6
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
   
 0.899
A0A0E0PQI9
Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.
  
  
0.878
A0A0E0PGP7
Beta-hexosaminidase.
  
 
 0.870
A0A0E0Q5A7
Phosphotransferase.
     
 0.849
A0A0E0QMS1
Uncharacterized protein.
  
 
 0.748
A0A0E0QWE0
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.748
A0A0E0NDV5
Xylose isomerase.
  
 
 0.740
A0A0E0QCI5
Xylose isomerase.
  
 
 0.740
A0A0E0NGT6
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.700
A0A0E0PA24
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.700
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.