STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0Q4U2Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
A0A0E0NHP4
RRM domain-containing protein.
    
  0.666
A0A0E0QBJ4
Uncharacterized protein.
   
 0.666
A0A0E0PEL1
SPRY domain-containing protein.
    
 0.657
A0A0E0NND5
Uncharacterized protein.
   
 0.632
A0A0E0R3S8
RRM domain-containing protein.
   
 0.632
A0A0E0RDB1
RRM domain-containing protein.
   
 0.632
A0A0E0NW10
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.628
A0A0E0QBF5
Uncharacterized protein.
   
   0.628
A0A0E0NUZ5
MIF4G domain-containing protein.
   
 0.609
A0A0E0MXT3
CSP domain-containing protein.
    
 0.600
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.