STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0Q7M9Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)    
Predicted Functional Partners:
A0A0E0MV79
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.995
A0A0E0MVZ9
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.992
A0A0E0N0R8
Uncharacterized protein.
   
 0.992
A0A0E0PB60
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.992
A0A0E0P1H6
FCP1 homology domain-containing protein; Belongs to the universal ribosomal protein uL13 family.
   
 0.991
A0A0E0PP74
TRASH domain-containing protein.
   
 0.991
A0A0E0Q5Q4
Uncharacterized protein.
   
 0.991
A0A0E0RIW5
Ribosomal_L2_C domain-containing protein.
  
 0.991
A0A0E0N4R4
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.990
A0A0E0NLV7
Uncharacterized protein.
   
 0.990
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.