STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0Q9X9Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
A0A0E0P0F1
WASH_WAHD domain-containing protein.
    
 
 0.888
A0A0E0P8J4
Uncharacterized protein.
   
 
 0.855
A0A0E0P732
Uncharacterized protein.
    
 
 0.848
A0A0E0PT69
Uncharacterized protein.
   
 
 0.782
A0A0E0NCQ7
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.632
A0A0E0QMY4
AAA_23 domain-containing protein.
   
 
 0.587
A0A0E0NS93
Uncharacterized protein.
    
 
 0.556
A0A0E0P2P0
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.556
A0A0E0QVT5
Uncharacterized protein.
    
 
 0.556
A0A0E0NVU8
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.487
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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