STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QA52WD_REPEATS_REGION domain-containing protein. (339 aa)    
Predicted Functional Partners:
A0A0E0PVY5
Uncharacterized protein.
    
 0.699
A0A0E0P462
Uncharacterized protein.
  
  0.678
A0A0E0PVL3
Uncharacterized protein.
  
 
  0.662
A0A0E0PG24
Protein kinase domain-containing protein.
    
 0.654
A0A0E0R443
B30.2/SPRY domain-containing protein.
    
 0.603
A0A0E0RDN6
B30.2/SPRY domain-containing protein.
    
 0.603
A0A0E0RCE6
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.602
A0A0E0NRB0
WD_REPEATS_REGION domain-containing protein.
    
 0.599
A0A0E0NPS4
Uncharacterized protein.
    
 0.578
A0A0E0N7N4
WD_REPEATS_REGION domain-containing protein.
  
0.574
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.