STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QC89Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1316 aa)    
Predicted Functional Partners:
A0A0E0MXI6
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
  
 0.999
A0A0E0N6F4
Structural maintenance of chromosomes protein.
   
 0.999
A0A0E0PPG0
Structural maintenance of chromosomes protein.
   
 0.999
A0A0E0PVZ1
Cnd3 domain-containing protein.
   
 0.999
A0A0E0N9E3
Uncharacterized protein.
   
 0.967
A0A0E0P3C6
DUF641 domain-containing protein.
   
 0.964
A0A0E0RKM3
Structural maintenance of chromosomes protein.
   
 0.964
A0A0E0PS92
SMC_N domain-containing protein.
   
 0.959
A0A0E0QMY4
AAA_23 domain-containing protein.
   
 0.959
A0A0E0R9Y6
AAA_23 domain-containing protein.
   
 0.959
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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