STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QCI9AP2/ERF domain-containing protein. (318 aa)    
Predicted Functional Partners:
A0A0E0N4I1
BHLH domain-containing protein.
      
 0.810
A0A0E0Q5Y6
Uncharacterized protein.
  
 
 
 0.586
A0A0E0NTQ1
Macro domain-containing protein.
      
 0.497
A0A0E0QU07
AP2/ERF domain-containing protein.
  
     0.468
A0A0E0QU83
Uncharacterized protein.
  
   
 0.466
A0A0E0R0W4
Dof-type domain-containing protein.
  
     0.442
A0A0E0MRW8
LOB domain-containing protein.
      
 0.438
A0A0E0MSN4
FAD-binding PCMH-type domain-containing protein.
      
 0.435
A0A0E0PDJ3
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.422
A0A0E0Q2P9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.422
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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