STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QDS2Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
A0A0E0Q0R9
PRKCSH domain-containing protein.
   
 0.951
A0A0E0P406
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.902
A0A0E0PIH0
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.902
A0A0E0NSQ3
Uncharacterized protein.
    
 0.871
A0A0E0NY16
SATase_N domain-containing protein.
    
 0.871
A0A0E0PAI1
Uncharacterized protein.
    
 0.871
A0A0E0NCR6
ANK_REP_REGION domain-containing protein.
    
 0.827
A0A0E0NKS0
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.827
A0A0E0NPS8
Uncharacterized protein.
    
 0.827
A0A0E0PB32
AAA domain-containing protein.
    
 0.827
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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