STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QED8HTH myb-type domain-containing protein. (341 aa)    
Predicted Functional Partners:
A0A0E0PF16
MPN domain-containing protein.
    
  0.561
A0A0E0NJZ6
Uncharacterized protein.
   
 0.559
A0A0E0MVN0
Ubiquitin-like domain-containing protein.
    
 0.551
A0A0E0PHV9
Ubiquitin-like domain-containing protein.
    
 0.551
A0A0E0P2Q1
Uncharacterized protein.
    
 0.544
A0A0E0QZ48
Uncharacterized protein.
    
 0.544
A0A0E0NRB0
WD_REPEATS_REGION domain-containing protein.
    
  0.528
A0A0E0PL14
Uncharacterized protein.
   
 
  0.514
A0A0E0MUN8
PCI domain-containing protein.
   
 
  0.499
A0A0E0MUH7
E2_bind domain-containing protein.
     
 0.497
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.