STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QEZ5Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
A0A0E0QI04
Uncharacterized protein.
 
   
 0.598
A0A0E0PAU7
Uncharacterized protein.
      
 0.478
A0A0E0NN88
TCP domain-containing protein.
  
     0.466
A0A0E0QXV9
GRAM domain-containing protein.
  
     0.457
A0A0E0MTN4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.451
A0A0E0QD72
Uncharacterized protein.
      
 0.440
A0A0E0P285
PORR domain-containing protein.
      
 0.439
A0A0E0NKK8
Uncharacterized protein.
  
     0.438
A0A0E0N5R4
Uncharacterized protein.
      
 0.431
A0A0E0PYD9
Uncharacterized protein.
  
     0.428
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.