STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QH19Uncharacterized protein. (316 aa)    
Predicted Functional Partners:
A0A0E0NY13
Uncharacterized protein.
   
 0.765
A0A0E0MZD1
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.753
A0A0E0QYL4
Uncharacterized protein.
    
 0.752
A0A0E0RBG1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.752
A0A0E0NV13
Nuclear pore protein.
   
 0.741
A0A0E0QUE8
Uncharacterized protein.
   
 0.732
A0A0E0Q6U9
Nup54 domain-containing protein.
    
 0.719
A0A0E0PRH4
Uncharacterized protein.
    
 0.706
A0A0E0N2C9
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.699
A0A0E0NYY8
Uncharacterized protein.
    
 0.699
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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