STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QKE4Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
A0A0E0NUL3
Bms1-type G domain-containing protein.
   
 
 0.993
A0A0E0QEH4
Brix domain-containing protein.
   
   0.987
A0A0E0Q0R7
WD_REPEATS_REGION domain-containing protein.
   
 
 0.971
A0A0E0QQ80
Uncharacterized protein.
   
 
 0.968
A0A0E0PQ18
WD_REPEATS_REGION domain-containing protein.
   
 
 0.953
A0A0E0PCB2
BP28CT domain-containing protein.
   
   0.946
A0A0E0MXE6
Uncharacterized protein.
   
 
 0.944
A0A0E0QYK5
Uncharacterized protein.
   
 
 0.943
A0A0E0P0Y1
WD_REPEATS_REGION domain-containing protein.
   
   0.942
A0A0E0MSA7
WD_REPEATS_REGION domain-containing protein.
   
   0.940
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.