STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QLJ5FHA domain-containing protein. (406 aa)    
Predicted Functional Partners:
A0A0E0Q8U0
Thioredoxin domain-containing protein.
    
 0.931
A0A0E0NT61
Uncharacterized protein.
    
 0.903
A0A0E0QIC8
Tyrosine-protein phosphatase domain-containing protein.
    
 0.903
A0A0E0RGC4
Uncharacterized protein.
    
 0.777
A0A0E0ND42
Uncharacterized protein.
    
 0.762
A0A0E0NUM2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.727
A0A0E0QCU0
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.727
A0A0E0P6K7
Deacetylase sirtuin-type domain-containing protein.
    
 0.719
A0A0E0REK3
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 0.719
A0A0E0Q234
ABC transporter domain-containing protein.
    
 0.698
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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