A0A0E0QMA6 protein (Oryza rufipogon) - STRING interaction network

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Score

A0A0E0QMA6

Uncharacterized protein. (305 aa)

Predicted Functional Partners:

A0A0E0NL73

0.719

A0A0E0PVV0

0.708

A0A0E0Q252

0.701

A0A0E0P1U6

0.667

A0A0E0NHP4

0.631

A0A0E0NUZ5

0.627

A0A0E0NCR4

0.611

A0A0E0NKI6

0.606

A0A0E0N8V7

0.597

A0A0E0QBG5

0.592

Your Current Organism:

Oryza rufipogon

NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0E0N8V7	A0A0E0NHP4	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.826
A0A0E0N8V7	A0A0E0NKI6	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.597
A0A0E0N8V7	A0A0E0PVV0	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.656
A0A0E0N8V7	A0A0E0Q252	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.656
A0A0E0N8V7	A0A0E0QBG5	RPOL4c domain-containing protein.	RRM domain-containing protein.	0.702
A0A0E0N8V7	A0A0E0QMA6	RPOL4c domain-containing protein.	Uncharacterized protein.	0.597
A0A0E0NCR4	A0A0E0NHP4	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.948
A0A0E0NCR4	A0A0E0NKI6	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.611
A0A0E0NCR4	A0A0E0NUZ5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	MIF4G domain-containing protein.	0.970
A0A0E0NCR4	A0A0E0PVV0	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.872
A0A0E0NCR4	A0A0E0Q252	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.872
A0A0E0NCR4	A0A0E0QBG5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.421
A0A0E0NCR4	A0A0E0QMA6	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Uncharacterized protein.	0.611
A0A0E0NHP4	A0A0E0N8V7	RRM domain-containing protein.	RPOL4c domain-containing protein.	0.826
A0A0E0NHP4	A0A0E0NCR4	RRM domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.948
A0A0E0NHP4	A0A0E0NKI6	RRM domain-containing protein.	RRM domain-containing protein.	0.631
A0A0E0NHP4	A0A0E0NL73	RRM domain-containing protein.	RRM domain-containing protein.	0.895
A0A0E0NHP4	A0A0E0NUZ5	RRM domain-containing protein.	MIF4G domain-containing protein.	0.999
A0A0E0NHP4	A0A0E0P1U6	RRM domain-containing protein.	RRM domain-containing protein.	0.401
A0A0E0NHP4	A0A0E0PVV0	RRM domain-containing protein.	RRM domain-containing protein.	0.905