STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QRF8Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (217 aa)    
Predicted Functional Partners:
A0A0E0MS64
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.991
A0A0E0NZ17
Uncharacterized protein.
   
 0.986
A0A0E0N5H5
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.983
A0A0E0N7Z7
Uncharacterized protein.
    
 0.983
A0A0E0NMY7
t-SNARE coiled-coil homology domain-containing protein.
    
 0.966
A0A0E0QMG6
t-SNARE coiled-coil homology domain-containing protein.
    
 0.966
A0A0E0NYC1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.942
A0A0E0QN94
Uncharacterized protein.
    
 0.909
A0A0E0QQX0
Uncharacterized protein.
    
 0.909
A0A0E0RIB4
Uncharacterized protein.
    
 0.909
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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