STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QRT6Uncharacterized protein. (76 aa)    
Predicted Functional Partners:
A0A0E0PVY5
Uncharacterized protein.
    
 0.640
A0A0E0PG37
PEROXIDASE_4 domain-containing protein.
  
 
  0.617
A0A0E0NJW8
Uncharacterized protein.
    
 0.600
A0A0E0QRB9
NAC domain-containing protein.
  
 
 0.585
A0A0E0QBT6
PEROXIDASE_4 domain-containing protein.
  
 
  0.579
A0A0E0Q468
PEROXIDASE_4 domain-containing protein.
  
 
  0.578
A0A0E0R1H8
Uncharacterized protein.
  
 
  0.570
A0A0E0PG71
Methyltransferase.
  
 
  0.567
A0A0E0NW27
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
 
  0.563
A0A0E0P3F5
NAC domain-containing protein.
  
 
 0.549
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.