STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QSC4HSF_DOMAIN domain-containing protein. (304 aa)    
Predicted Functional Partners:
A0A0E0R8F6
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
     
 0.928
A0A0E0P0J8
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
   
 0.673
A0A0E0PWA7
Uncharacterized protein.
    
 0.652
A0A0E0QKS7
HATPase_c domain-containing protein.
    
 0.607
A0A0E0NVU9
CS domain-containing protein.
    
 0.576
A0A0E0NZ18
CS domain-containing protein.
    
 0.576
A0A0E0QHZ8
CS domain-containing protein.
    
 0.576
A0A0E0QSX0
Uncharacterized protein.
    
 0.567
A0A0E0QUB9
Uncharacterized protein.
    
 0.567
A0A0E0QUC4
Uncharacterized protein.
    
 0.567
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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