STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0QYR2Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
A0A0E0RK88
Uncharacterized protein.
  
 
 0.965
A0A0E0NRK6
PALP domain-containing protein.
  
 0.943
A0A0E0NRR0
Hcy-binding domain-containing protein.
  
 
 0.938
A0A0E0QYR4
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.935
A0A0E0N344
Hcy-binding domain-containing protein.
  
 
 0.931
A0A0E0QZA2
Hcy-binding domain-containing protein.
  
 
 0.931
A0A0E0RJT0
Hcy-binding domain-containing protein.
  
 
 0.931
A0A0E0R823
Adenosylhomocysteinase.
  
 0.930
A0A0E0N8D3
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.924
A0A0E0P5A0
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.924
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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