STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0R5A3Uncharacterized protein. (1265 aa)    
Predicted Functional Partners:
A0A0E0PM20
Uncharacterized protein.
    
 0.496
A0A0E0N972
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.435
A0A0E0Q4I0
Small nuclear ribonucleoprotein-associated protein.
    
 0.431
A0A0E0N8H5
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.427
A0A0E0NS86
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.427
A0A0E0NTV4
Uncharacterized protein.
    
 0.427
A0A0E0NUH1
Uncharacterized protein.
    
 0.427
A0A0E0PU50
Uncharacterized protein.
  
 
  0.427
A0A0E0N830
Sm domain-containing protein.
    
 0.426
A0A0E0PKL0
Small nuclear ribonucleoprotein Sm D2.
    
 0.426
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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