STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0R602Neprosin domain-containing protein. (270 aa)    
Predicted Functional Partners:
A0A0E0Q9P7
Uncharacterized protein.
  
 
  0.589
A0A0E0Q9P8
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.578
A0A0E0NVJ2
PEROXIDASE_4 domain-containing protein.
  
 
  0.548
A0A0E0ND00
Uncharacterized protein.
  
 
   0.542
A0A0E0Q9P6
Uncharacterized protein.
  
 
  0.540
A0A0E0ND04
Uncharacterized protein.
  
 
   0.529
A0A0E0PZV2
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.527
A0A0E0RIM4
Uncharacterized protein.
  
     0.518
psbF
Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.
   
 0.514
A0A0E0P8T5
Uncharacterized protein.
  
 
  0.512
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.