STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0R688PMR5N domain-containing protein. (542 aa)    
Predicted Functional Partners:
A0A0E0R398
Uncharacterized protein.
  
     0.532
A0A0E0RCT2
Uncharacterized protein.
  
     0.532
A0A0E0NGM5
Uncharacterized protein.
  
     0.524
A0A0E0PLG6
Uncharacterized protein.
  
     0.523
A0A0E0PJX6
Uncharacterized protein.
  
     0.520
A0A0E0NJR3
LAGLIDADG_2 domain-containing protein.
  
     0.501
A0A0E0N5D8
Uncharacterized protein.
  
     0.500
A0A0E0QJT5
Uncharacterized protein.
  
     0.500
A0A0E0NF75
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
  
     0.495
A0A0E0NV13
Nuclear pore protein.
  
     0.493
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.