STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RCF6Phenylalanine ammonia-lyase. (700 aa)    
Predicted Functional Partners:
A0A0E0P4E2
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.877
A0A0E0NJX8
Aminotran_1_2 domain-containing protein.
    
 0.864
A0A0E0RBG9
Aminotran_1_2 domain-containing protein.
   
 
 0.834
A0A0E0NEM8
Uncharacterized protein.
   
 
 0.829
A0A0E0PKR4
Uncharacterized protein.
   
 
 0.822
A0A0E0R9M8
Aminotran_1_2 domain-containing protein.
   
 
 0.821
A0A0E0NLJ6
PALP domain-containing protein.
  
 
 0.773
A0A0E0RH67
Amidohydro-rel domain-containing protein.
  
 
 0.773
A0A0E0N477
Uncharacterized protein.
   
 
 0.763
A0A0E0P771
Uncharacterized protein.
    
 0.667
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.