STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RE01Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
A0A0E0NNJ9
Expansin-like EG45 domain-containing protein.
  
     0.526
A0A0E0NAC3
ALOG domain-containing protein.
  
     0.525
A0A0E0P5D0
Uncharacterized protein.
  
     0.521
A0A0E0QU55
Homeobox domain-containing protein.
  
   
 0.519
A0A0E0QRB1
TCP domain-containing protein.
  
     0.518
A0A0E0R5Z2
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.518
A0A0E0PD72
Uncharacterized protein.
  
     0.514
A0A0E0PD98
FLZ-type domain-containing protein.
  
     0.511
A0A0E0N6Z9
TCP domain-containing protein.
  
     0.509
A0A0E0P5Q7
TCP domain-containing protein.
  
     0.507
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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