STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RG36Gnk2-homologous domain-containing protein. (165 aa)    
Predicted Functional Partners:
A0A0E0R1H5
Trehalase.
  
 0.710
A0A0E0PFX4
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.666
A0A0E0N1N0
Uncharacterized protein.
  
 
 0.579
A0A0E0N566
CBM20 domain-containing protein.
  
 
 0.579
A0A0E0NKW7
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
  
 
 0.579
A0A0E0NLC4
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.579
A0A0E0NLC6
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.579
A0A0E0NRH8
Uncharacterized protein.
  
 
 0.579
A0A0E0P1I4
Uncharacterized protein.
  
 
 0.579
A0A0E0P8N2
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.579
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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