Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0E0MTN4 | A0A0E0PFA6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.575 |
A0A0E0MTN4 | A0A0E0RGY0 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.476 |
A0A0E0NNF5 | A0A0E0P0Q6 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.993 |
A0A0E0NNF5 | A0A0E0R1G2 | ERCC4 domain-containing protein. | HHH_2 domain-containing protein. | 0.999 |
A0A0E0NNF5 | A0A0E0R4Z1 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.977 |
A0A0E0NNF5 | A0A0E0RGY0 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.502 |
A0A0E0P0Q6 | A0A0E0NNF5 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.993 |
A0A0E0P0Q6 | A0A0E0R1G2 | Uncharacterized protein. | HHH_2 domain-containing protein. | 0.993 |
A0A0E0P0Q6 | A0A0E0R4Z1 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
A0A0E0P0Q6 | A0A0E0RGY0 | Uncharacterized protein. | Uncharacterized protein. | 0.485 |
A0A0E0P8G5 | A0A0E0RGY0 | F-box domain-containing protein. | Uncharacterized protein. | 0.498 |
A0A0E0PFA6 | A0A0E0MTN4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.575 |
A0A0E0PFA6 | A0A0E0PHL1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.440 |
A0A0E0PFA6 | A0A0E0RGY0 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.535 |
A0A0E0PHL1 | A0A0E0PFA6 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.440 |
A0A0E0PHL1 | A0A0E0PUN5 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.486 |
A0A0E0PHL1 | A0A0E0RGY0 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
A0A0E0PUN5 | A0A0E0PHL1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.486 |
A0A0E0PUN5 | A0A0E0RGY0 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.499 |
A0A0E0R1G2 | A0A0E0NNF5 | HHH_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.999 |
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