STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RIQ7PseudoU_synth_2 domain-containing protein. (345 aa)    
Predicted Functional Partners:
A0A0E0RFG8
Uncharacterized protein.
  
 
 0.849
A0A0E0NZP7
SpoU_methylase domain-containing protein.
  
 
 0.807
A0A0E0R7Z1
G domain-containing protein.
   
 
 0.786
A0A0E0QH78
Ribosomal_L18e/L15P domain-containing protein.
  
   0.778
A0A0E0Q1R5
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
   0.770
A0A0E0PSY0
Uncharacterized protein.
    
 
 0.769
A0A0E0NRA2
L51_S25_CI-B8 domain-containing protein.
   
   0.757
A0A0E0N345
TRUD domain-containing protein.
    
 
 0.745
A0A0E0PPS4
TRUD domain-containing protein.
    
 
 0.745
A0A0E0NCM6
Uncharacterized protein.
   
   0.737
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.