STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RJE3Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
A0A0E0NEQ7
Uncharacterized protein.
    
 
 0.704
A0A0E0QUK2
Uncharacterized protein.
    
 
 0.704
A0A0E0NJW8
Uncharacterized protein.
    
 0.565
A0A0E0QBY9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.534
A0A0E0QA45
Uncharacterized protein.
    
 0.528
A0A0E0QYC0
Uncharacterized protein.
    
 0.521
A0A0E0MQD1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.508
A0A0E0PG24
Protein kinase domain-containing protein.
    
 0.488
A0A0E0QRR4
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
  0.484
A0A0E0NZL4
WD_REPEATS_REGION domain-containing protein.
    
 0.475
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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