STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0RKM1Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
A0A0E0P1G6
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.526
A0A0E0N864
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.522
A0A0E0NIH7
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.509
A0A0E0R1F5
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.504
A0A0E0QPP4
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.450
A0A0E0NFU4
Uncharacterized protein.
      
 0.437
A0A0E0QL10
Uncharacterized protein.
     
 0.437
A0A0E0QT33
Uncharacterized protein.
     
 0.437
A0A0E0NUE6
Uncharacterized protein.
     
 0.430
A0A0E0Q6I9
Uncharacterized protein.
     
 0.430
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon Griff., common wild rice, red rice
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