STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0012Hypothetical protein. (1199 aa)    
Predicted Functional Partners:
chiD
Chitinase.
  
 
 0.907
Lfee_2530
Membrane protein.
  
  
 0.787
aprE
Serine metalloprotease.
  
 
 0.780
Lfee_3134
Serine/threonine protein kinase.
  
    0.777
Lfee_0226
Trypsin.
  
  
 0.776
Lfee_2017
Ankyrin repeats (3 copies).
  
     0.774
Lfee_0046
Carbohydrate-selective porin, OprB family.
  
     0.773
Lfee_0353
Hypothetical protein.
  
     0.772
Lfee_0387
GNAT family acetyltransferase.
  
     0.772
Lfee_1342
Phosphotransferase enzyme family protein.
  
     0.772
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.