STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0015Deoxyribodipyrimidine photolyase-related protein. (512 aa)    
Predicted Functional Partners:
fabG1_2
2-deoxy-D-gluconate 3-dehydrogenase.
       0.756
phrA
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.653
Lfee_1379
Hypothetical protein.
 
     0.618
pds
Flavin containing amine oxidoreductase.
 
   
 0.548
Lfee_0020
Hypothetical protein.
 
   
 0.524
Lfee_1638
Hypothetical protein; Belongs to the UPF0753 family.
  
     0.453
Lfee_0017
Hypothetical protein.
       0.424
Lfee_1634
RND efflux membrane fusion protein.
  
     0.424
Lfee_0871
Hypothetical protein.
     
 0.407
Lfee_1633
Multidrug efflux protein, outer membrane component.
  
     0.402
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.