Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_0040 | Lfee_1717 | Lfee_0040 | Lfee_1717 | Transmembrane protein. | EamA-like transporter family protein. | 0.587 |
Lfee_0040 | Lfee_2699 | Lfee_0040 | Lfee_2699 | Transmembrane protein. | Protein-tyrosine phosphatase. | 0.412 |
Lfee_0040 | dotA | Lfee_0040 | Lfee_2689 | Transmembrane protein. | Defect in organelle trafficking protein DotA. | 0.402 |
Lfee_0040 | soxS | Lfee_0040 | Lfee_0039 | Transmembrane protein. | AraC family transcriptional regulator. | 0.601 |
Lfee_0040 | spkB_3 | Lfee_0040 | Lfee_2296 | Transmembrane protein. | Protein IcmE (DotG). | 0.452 |
Lfee_1717 | Lfee_0040 | Lfee_1717 | Lfee_0040 | EamA-like transporter family protein. | Transmembrane protein. | 0.587 |
Lfee_2699 | Lfee_0040 | Lfee_2699 | Lfee_0040 | Protein-tyrosine phosphatase. | Transmembrane protein. | 0.412 |
Lfee_2699 | dotA | Lfee_2699 | Lfee_2689 | Protein-tyrosine phosphatase. | Defect in organelle trafficking protein DotA. | 0.737 |
Lfee_2699 | spkB_3 | Lfee_2699 | Lfee_2296 | Protein-tyrosine phosphatase. | Protein IcmE (DotG). | 0.746 |
dotA | Lfee_0040 | Lfee_2689 | Lfee_0040 | Defect in organelle trafficking protein DotA. | Transmembrane protein. | 0.402 |
dotA | Lfee_2699 | Lfee_2689 | Lfee_2699 | Defect in organelle trafficking protein DotA. | Protein-tyrosine phosphatase. | 0.737 |
dotA | spkB_3 | Lfee_2689 | Lfee_2296 | Defect in organelle trafficking protein DotA. | Protein IcmE (DotG). | 0.777 |
soxS | Lfee_0040 | Lfee_0039 | Lfee_0040 | AraC family transcriptional regulator. | Transmembrane protein. | 0.601 |
spkB_3 | Lfee_0040 | Lfee_2296 | Lfee_0040 | Protein IcmE (DotG). | Transmembrane protein. | 0.452 |
spkB_3 | Lfee_2699 | Lfee_2296 | Lfee_2699 | Protein IcmE (DotG). | Protein-tyrosine phosphatase. | 0.746 |
spkB_3 | dotA | Lfee_2296 | Lfee_2689 | Protein IcmE (DotG). | Defect in organelle trafficking protein DotA. | 0.777 |