STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0056Glutamine amidotransferase, class I. (233 aa)    
Predicted Functional Partners:
eutG
Alcohol dehydrogenase.
 
     0.829
gapN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
 0.810
puuA
Glutamine synthetase.
 
   
 0.793
guaC
Inosine 5'-monophosphate dehydrogenase.
  
 
 0.752
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.752
ycdT
Sensor histidine kinase.
    
  0.692
Lfee_0399
Regulatory protein (GGDEF domain).
    
  0.692
cyaA_1
Fused adenylate cyclase/two component hybrid sensor/regulator.
    
  0.676
cyaA_2
Fused adenylate cyclase/two component hybrid sensor/regulator.
    
  0.676
Lfee_0057
SMP-30/Gluconolaconase/LRE-like region.
       0.671
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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