STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0100Polysaccharide deacetylase. (302 aa)    
Predicted Functional Partners:
Lfee_2406
Dolichyl-phosphate mannosyltransferase.
 
 
 0.693
spkB_3
Protein IcmE (DotG).
  
     0.686
Lfee_3043
Hypothetical protein.
  
     0.593
enhA_3
Enhanced entry protein EnhA.
  
     0.569
enhA_2
Enhanced entry protein EnhA.
  
     0.556
enhA_4
Enhanced entry protein EnhA.
  
     0.536
Lfee_0099
Cupin.
       0.528
Lfee_2292
IcmJ protein.
  
     0.514
Lfee_3143
Enhanced entry protein EnhA.
  
     0.498
dotA
Defect in organelle trafficking protein DotA.
  
     0.493
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.