STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0116Hypothetical protein. (419 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
  
 0.905
Lfee_0762
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.786
cfiA_1
Oxaloacetate decarboxylase subunit alpha.
    
  0.720
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.717
Lfee_0117
Phosphoesterase.
       0.671
tycC_2
Peptide synthetase, non-ribosomal.
    
 0.604
Lfee_2374
Acetyltransferase.
     
 0.529
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
    
 0.504
accC_2
Pyruvate carboxylase subunit A.
  
 
 0.485
mccA
Acyl CoA carboxylase subunit alpha.
  
 
 0.485
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.