Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lfee_0117Phosphoesterase. (268 aa)    
Predicted Functional Partners:
Lfee_2653
Hypothetical protein.
  
     0.717
Lfee_0116
Hypothetical protein.
       0.671
Lfee_1309
GNAT family acetyltransferase.
  
     0.671
Lfee_0200
Coiled-coil protein.
  
     0.585
Lfee_2357
Interaptin.
  
     0.570
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.569
Lfee_0671
RasGEF domain protein.
  
     0.556
Lfee_2453
Glycosyl hydrolase family 76.
  
     0.544
Lfee_2774
Hypothetical protein.
  
     0.518
Lfee_0818
Tubulin-tyrosine ligase family protein.
  
     0.509
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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