Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
htrA_2DegP protease. (355 aa)    
Predicted Functional Partners:
Lfee_0204
Hypothetical protein.
       0.860
Lfee_0203
Hypothetical protein.
       0.688
Lfee_0932
3-oxoacyl-ACP reductase.
   
  0.585
degP
DegP protease (Do-like, S2-serine-like).
  
     0.578
Lfee_3240
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
     0.526
Lfee_2490
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
 
  0.522
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
  0.499
ycaC
YcaC related amidohydrolase.
  
    0.490
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
   0.460
Lfee_1201
Ankyrin repeat protein.
  
 
  0.440
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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