STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0252Prophage CP4-57 regulatory protein AlpA. (72 aa)    
Predicted Functional Partners:
intA_1
Integrase; Belongs to the 'phage' integrase family.
 
   
 0.869
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.789
Lfee_0253
Hypothetical protein.
       0.773
Lfee_0254
Hypothetical protein.
       0.773
Lfee_0255
Hypothetical protein.
       0.773
intA_3
Integrase; Belongs to the 'phage' integrase family.
 
   
 0.727
intA_2
Integrase; Belongs to the 'phage' integrase family.
 
   
 0.724
intA_4
Phage-related integrase; Belongs to the 'phage' integrase family.
 
   
 0.670
Lfee_0251
Hypothetical protein.
       0.558
Lfee_0812
Hypothetical protein.
 
     0.555
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.