Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0278 | tatA | Lfee_0278 | Lfee_0276 | SCP-2 sterol transfer family protein. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.805 |
| Lfee_0278 | tatB | Lfee_0278 | Lfee_0275 | SCP-2 sterol transfer family protein. | TatB protein (twin arginine translocation). | 0.805 |
| Lfee_0278 | ubiB | Lfee_0278 | Lfee_0277 | SCP-2 sterol transfer family protein. | Ubiquinone biosynthesis AarF; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.820 |
| Lfee_0278 | ubiE | Lfee_0278 | Lfee_0279 | SCP-2 sterol transfer family protein. | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.862 |
| Lfee_0278 | ycaD | Lfee_0278 | Lfee_0280 | SCP-2 sterol transfer family protein. | Putative MFS-type transporter YcaD. | 0.539 |
| Lfee_0543 | tatA | Lfee_0543 | Lfee_0276 | Putative rhomboid family protein. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.853 |
| Lfee_0543 | tatB | Lfee_0543 | Lfee_0275 | Putative rhomboid family protein. | TatB protein (twin arginine translocation). | 0.853 |
| cueO | guaA | Lfee_2812 | Lfee_0955 | Multicopper oxidase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.773 |
| cueO | tatA | Lfee_2812 | Lfee_0276 | Multicopper oxidase. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.541 |
| cueO | tatB | Lfee_2812 | Lfee_0275 | Multicopper oxidase. | TatB protein (twin arginine translocation). | 0.504 |
| cueO | tatC | Lfee_2812 | Lfee_1775 | Multicopper oxidase. | Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.844 |
| guaA | cueO | Lfee_0955 | Lfee_2812 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Multicopper oxidase. | 0.773 |
| guaA | tatA | Lfee_0955 | Lfee_0276 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.966 |
| guaA | tatB | Lfee_0955 | Lfee_0275 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | TatB protein (twin arginine translocation). | 0.966 |
| hisI | tatA | Lfee_0922 | Lfee_0276 | Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family. | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.569 |
| hisI | tatB | Lfee_0922 | Lfee_0275 | Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family. | TatB protein (twin arginine translocation). | 0.569 |
| tatA | Lfee_0278 | Lfee_0276 | Lfee_0278 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCP-2 sterol transfer family protein. | 0.805 |
| tatA | Lfee_0543 | Lfee_0276 | Lfee_0543 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Putative rhomboid family protein. | 0.853 |
| tatA | cueO | Lfee_0276 | Lfee_2812 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Multicopper oxidase. | 0.541 |
| tatA | guaA | Lfee_0276 | Lfee_0955 | TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.966 |
page 1 of 3