Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0328 | Lfee_0329 | Lfee_0328 | Lfee_0329 | Hypothetical protein. | Hypothetical protein. | 0.951 |
| Lfee_0328 | pksJ | Lfee_0328 | Lfee_0647 | Hypothetical protein. | Polyketide synthase module. | 0.426 |
| Lfee_0328 | tpm | Lfee_0328 | Lfee_0345 | Hypothetical protein. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.514 |
| Lfee_0329 | Lfee_0328 | Lfee_0329 | Lfee_0328 | Hypothetical protein. | Hypothetical protein. | 0.951 |
| Lfee_0329 | pksJ | Lfee_0329 | Lfee_0647 | Hypothetical protein. | Polyketide synthase module. | 0.475 |
| Lfee_0329 | tpm | Lfee_0329 | Lfee_0345 | Hypothetical protein. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.626 |
| Lfee_0348 | glmS | Lfee_0348 | Lfee_0344 | Hypothetical protein. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.434 |
| Lfee_0348 | tpm | Lfee_0348 | Lfee_0345 | Hypothetical protein. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.556 |
| Lfee_0348 | yciA | Lfee_0348 | Lfee_0347 | Hypothetical protein. | acyl-CoA thioester hydrolase. | 0.800 |
| Lfee_0348 | yhgF | Lfee_0348 | Lfee_0346 | Hypothetical protein. | Transcriptional accessory protein. | 0.800 |
| Lfee_0403 | tpm | Lfee_0403 | Lfee_0345 | EPTP domain protein. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.513 |
| glmS | Lfee_0348 | Lfee_0344 | Lfee_0348 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Hypothetical protein. | 0.434 |
| glmS | pksJ | Lfee_0344 | Lfee_0647 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Polyketide synthase module. | 0.588 |
| glmS | tpm | Lfee_0344 | Lfee_0345 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.620 |
| glmS | tycC_2 | Lfee_0344 | Lfee_0691 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Peptide synthetase, non-ribosomal. | 0.487 |
| glmS | yciA | Lfee_0344 | Lfee_0347 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | acyl-CoA thioester hydrolase. | 0.480 |
| glmS | yhgF | Lfee_0344 | Lfee_0346 | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Transcriptional accessory protein. | 0.434 |
| mnmC | pksJ | Lfee_3112 | Lfee_0647 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Polyketide synthase module. | 0.505 |
| mnmC | tpm | Lfee_3112 | Lfee_0345 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. | 0.515 |
| mnmC | tycC_2 | Lfee_3112 | Lfee_0691 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Peptide synthetase, non-ribosomal. | 0.541 |
page 1 of 3