STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comADNA uptake/competence protein ComA. (748 aa)    
Predicted Functional Partners:
comF
Competence protein ComF.
 
  
 0.887
smf
Protein smf.
 
  
 0.883
outO
Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.785
lspF
Type II secretory pathway protein LspF.
   
  
 0.743
pilC
Pilus assembly protein PilC.
   
  
 0.743
Lfee_0384
Ectonucleoside triphosphate diphosphohydrolase I.
 
     0.661
Lfee_3154
DNA polymerase III, delta subunit.
 
   
 0.657
ybgF
Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
   
 0.617
barA_2
Sensory box histidine kinase/response regulator.
  
    0.610
luxQ_1
Sensory box histidine kinase/response regulator.
  
    0.610
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.