STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbFNucleotidyltransferase. (232 aa)    
Predicted Functional Partners:
hddA
D-glycero-alpha-D-manno-heptose 7-phosphate kinase.
 
 
 0.860
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.830
galE_1-2
NAD dependent epimerase/dehydratase family protein.
  
  0.775
gmhA
Phosphoheptose isomerase.
 
  
 0.733
Lfee_0445
protein-L-isoaspartate-O-methyltransferase.
  
 0.713
tal
Transaldolase.
 
     0.637
glf
UDP-galactopyranose mutase.
 
     0.635
Lfee_3187
Putative phosphotransferase.
 
 
 0.604
strE
NAD dependent epimerase/dehydratase family protein.
  
  0.550
gmhB
D,D-heptose 1,7-bisphosphate phosphatase.
 
 0.531
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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