Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lfee_0449Ankyrin repeat protein. (380 aa)    
Predicted Functional Partners:
Lfee_0448
Ras family GTPase.
 
 
  0.829
Lfee_2486
Ankyrin repeat-containing protein.
  
     0.774
Lfee_3046
Ankyrin repeats (3 copies).
  
     0.753
Lfee_1930
Ankyrin repeat-containing protein.
  
     0.721
yrrB
Methyltransferase.
  
 
  0.572
arp
Ankyrin repeat domain-containing protein.
  
     0.565
metG
Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.561
ralF
RalF protein, translocated into host cells by the Dot/Icm system.
  
     0.560
Lfee_3134
Serine/threonine protein kinase.
 
     0.533
Lfee_0353
Hypothetical protein.
  
 
  0.505
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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